JIRA9 - problem with pop-ups

Hello,
Last time we checked our plugin on new jira’s version. We noticed strange behaviour in pop-ups working. They are shown up for ~1 second and then a page changes to window content:

We are using the aui-dialog2. The solution works properly on jira 8.x versions. There aren’t any code changes.

Do you have any idea, how to fix it?

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